ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models

Darriba, Diego; Posada González, David; Kozlov, Alexey M; Stamatakis, Alexandros; Morel, Benoit; Flouri, Tomas

doi:10.1093/molbev/msz189

Darriba, Diego; Posada González, David

; Kozlov, Alexey M; Stamatakis, Alexandros; Morel, Benoit; Flouri, Tomas

DATE: 2019-08-21

UNIVERSAL IDENTIFIER: http://hdl.handle.net/11093/2303

EDITED VERSION: https://academic.oup.com/mbe/article/37/1/291/5552155

UNESCO SUBJECT: 2409 Genética ; 1203.02 Lenguajes Algorítmicos ; 1203.04 Inteligencia Artificial

DOCUMENT TYPE: article

ABSTRACT

ModelTest-NG is a reimplementation from scratch of jModelTest and ProtTest, two popular tools for selecting the best-fit nucleotide and amino acid substitution models, respectively. ModelTest-NG is one to two orders of magnitude faster than jModelTest and ProtTest but equally accurate and introduces several new features, such as ascertainment bias correction, mixture, and free-rate models, or the automatic processing of single partitions. ModelTest-NG is available under a GNU GPL3 license at https://github.com/ddarriba/modeltest , last accessed September 2, 2019.

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